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View Structure Prediction Details

Protein: CE28051
Organism: Caenorhabditis elegans
Length: 559 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28051.

Description E-value Query
Range
Subject
Range
gi|73953049 - gi|73953049|ref|XP_851537.1| PREDICTED: similar to calcium/calmodulin-dependent protein kinase II ga...
553.0 [0..4] [553..6]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNASTKFSD NYDVKEELGK GAFSVVRRCV HKTTGLEFAA KIINTKKLSA RDFQKLEREA  60
   61 RICRKLQHPN IVRLHDSIQE ESFHYLVFDL VTGGELFEDI VAREFYSEAD ASHCIQQILE 120
  121 SIAYCHSNGI VHRDLKPENL LLASKAKGAA VKLADFGLAI EVNDSEAWHG FAGTPGYLSP 180
  181 EVLKKDPYSK PVDIWACGVI LYILLVGYPP FWDEDQHRLY AQIKAGAYDY PSPEWDTVTP 240
  241 EAKSLIDSML TVNPKKRITA DQALKVPWIC NRERVASAIH RQDTVDCLKK FNARRKLKGA 300
  301 ILTTMIATRN LSSKRSYRLT LGAEKLVISM KNIEYWQVLL NKIFATY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.09691
Match: 2bdwA
Description: Crystal Structure of the Auto-Inhibited Kinase Domain of Calcium/Calmodulin Activated Kinase II
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [348-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIKMKQCRNL LNKKEQGPPS TIKESSESSQ TIDDNDSEKG GGQLKHENTV VRADGATGIV  60
   61 SSSNSSTASK SSST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [422-559]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLSAQKQDIV RVTQTLLDAI SCKDFETYTR LCDTSMTCFE PEALGNLIEG IEFHRFYFDG  60
   61 NRKNQVHTTM LNPNVHIIGE DAACVAYVKL TQFLDRNGEA HTRQSQESRV WSKKQGRWVC 120
  121 VHVHRSTQPS TNTTVSEF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.39794
Match: 2f86B
Description: The Association Domain of C. elegans CaMKII
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle