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View Structure Prediction Details

Protein: CE27969
Organism: Caenorhabditis elegans
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27969.

Description E-value Query
Range
Subject
Range
gi|186683534, gi... - gi|23125975|ref|ZP_00107887.1| COG3321: Polyketide synthase modules and related proteins [Nostoc pun...
200.0 [0..3] [242..1915]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDADTKCAS SWARGSRHEN FLTHFSPIFH SFLSFCLLFR SKMDAAKNSL WRNTILQTVV  60
   61 FSVNKATEQL KQSFSTENWE NVNKLRTGLS EMTERLEKCD KTTKEHDAIS EAVKRAGTVQ 120
  121 YMFDIGNREK CHVEERKHTI SNKARKRPGT DLDQIHEDLK PE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.522879
Match: 2fr0A
Description: No description for 2fr0A was found.

Predicted Domain #2
Region A:
Residues: [163-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAAKLLQKEV FRFVIVTSSA ISSTKLTMDS DFSTDLGLDF LDHVEVVMAI EEEFGFEIPD  60
   61 GDADRFKTPR DILQYIADKV DVFE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.522879
Match: 2dnwA
Description: No description for 2dnwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle