| Protein: | smn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 207 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for smn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
226.0 | [0..8] | [205..25] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MAKIWSKSGD MEVDDVWDDT ELIKMYDESL QEISKNETSA KITSRKFKGE DGKMYTWKVG 60
61 GKCMAPYEEN GEVTDYPATI DTIGGADNLE VGVTFIYYGG QAVVQMKDLW LNEEAIADAV 120
121 KAENDLQKTK KTSTVNSV
|
| Detection Method: |  |
| Confidence: | 24.221849 |
| Match: | 1g5vA |
| Description: | Survival motor neuron protein 1, smn |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.50121748882076 | bayes_pls_golite062009 |
| protein binding | 0.95084028886111 | bayes_pls_golite062009 |
|
Region A: Residues: [139-207] |
1 11 21 31 41 51
| | | | | |
1 AHSNSKSTSS APNTSMPFPS FAPPVPPNII AMAPVNQKEA MNSMLMSWYM SGYHTGYYQA 60
61 LADQKNVQN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
