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View Structure Prediction Details

Protein: CE27841
Organism: Caenorhabditis elegans
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27841.

Description E-value Query
Range
Subject
Range
gi|7497276 - gi|7497276|pir||T28787 hypothetical protein C41D11.5 - Caenorhabditis elegans
465.0 [0..1] [237..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSLSSLNNE NLNDEIIDFE SKCKRFPVMF KRAVCIHSSL QFVDLFMQNL MFSHGFSSTP  60
   61 IIARQEDETE VLSKTMLSFY KIRNEFREIF RSHHRGNVSE VAIFIGTCPV RSTYSYRVPI 120
  121 TICEAEDSTH KSCGDTCAEL NDFERRKINR DLFMHSCSKE QQSNETNKTN KNHRLFVFIK 180
  181 GSEDMVNEEI EEEDPPFGSK QSFHYSFIHE KCNCDGVPAP RNDGKWLRMV PYIVHSKH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle