| Protein: | sel-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 490 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sel-8.
| Description | E-value | Query Range |
Subject Range |
|
|
190.0 | [0..6] | [484..242] |
|
Region A: Residues: [1-344] |
1 11 21 31 41 51
| | | | | |
1 MDDLSEFFVI EEMFISEPSV AGMKPSTSKT THSPPPEEPT APFVNDNLPN PEDEPTIGDL 60
61 NAFHSGEELH RQRSELARAN YEKARPEMIA NQRAVTAHLF NRYTEDEERK RVEQQKNKEA 120
121 MNASTSAPTS SRNGGQSVEN RKRRNDVVVA PPTSEEEWKR AQQQHWMGQQ QPQMQFQMQQ 180
181 QYHSQQQQYI MMQQQHHHMT GMQQIHHQMP STSSADSIRS VPTPASSMHQ PSPAEMRNGC 240
241 GMSRNATMDM TCSPMSGGQP IVDENNLAVP EGEWFDKLAL AVAEQYNVDT ILGPDTYDTF 300
301 LAELDFSSSE SPTKQSPMEM NGDRMPSTAP PPAQNPQHIA QLQQ
|
| Detection Method: |  |
| Confidence: | 13.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [345-490] |
1 11 21 31 41 51
| | | | | |
1 QQNKMRLMQQ QQQEMQRIEQ QRRQQIMQQQ QQQQQQEHQR QQMLLQQQQQ QQQMQQHHQM 60
61 NGGGQFATQA HQQAAYMQQM QRMEQIRHQQ QQAQQHQQAQ QQHQQQAQHH QMGYGIPNGY 120
121 PQQMHMHPPA YGAHHMPQPT AFANIN
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
