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View Structure Prediction Details

Protein: CE27760
Organism: Caenorhabditis elegans
Length: 600 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27760.

Description E-value Query
Range
Subject
Range
gi|114607310 - gi|114607310|ref|XP_001173946.1| PREDICTED: molybdenum cofactor synthesis-step 1 protein isoform 4 [...
511.0 [0..2] [595..20]

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Predicted Domain #1
Region A:
Residues: [1-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCRAGKKLF QWSRVKSSTE EIVKQLTVPL REHAEPILTL TPEQKREAVR LKIQEIEHTK  60
   61 GQPPFFDMFM REHTYLRISL TEKCNFRCLY CMPAEGVPLK PKDKMLSNSE VLRLVKLFAA 120
  121 HGVDKVRLTG GEPTIRKDIV HIVEGISSTP GIKEVGITTN GLVLQRFLPQ LRDAGLTKIN 180
  181 ISIDSLDREK FAKMTRRDGF DKVWKAIELA RGYYPKVKLN VVVLKHQNEN EVVDFVNLTK 240
  241 DRNLDVRFIE FMPFGGNEFK NDNFIGYREM LNLIVDKYGD GVIRLSDSPN DTTKAYKIDG 300
  301 FQGQFGFITS MSDHFCNTCN RLRITADGNL KVCLHGNSEV SLRDRIRCGD SDEQLSEVIQ 360
  361 KAVNNKKARH AVFRNGRSEE PAKSSNDSYR GLTPVTSASS ILVHLPSSSL YHSHLHSSRH 420
  421 F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 1tv7A
Description: Structure of the S-adenosylmethionine dependent Enzyme MoaA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
biotin synthase activity 1.48360732734964 bayes_pls_golite062009
catalytic activity 1.48331922124015 bayes_pls_golite062009
radical SAM enzyme activity 1.33493838724551 bayes_pls_golite062009
coproporphyrinogen oxidase activity 1.04281361545494 bayes_pls_golite062009
sulfurtransferase activity 0.947420499060224 bayes_pls_golite062009
binding 0.526300140098941 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 0.46923164169016 bayes_pls_golite062009
transferase activity, transferring sulfur-containing groups 0.107588242235537 bayes_pls_golite062009
protein binding 0.018724452924034 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [422-600]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FISQIRCFST TYSVSSITHL LTHVDNNGNA KQVDVSQKDT STRTAVARGT IILTAEISRQ  60
   61 ISENTIKKGD VLTVAKIASI LGAKQVANLI PLCHPIRLDF VDTVFNHDIE NSKLHCISTA 120
  121 RCSGNTGVEM EALTACTIAL LTVYDMCKAI SQKMMLTNIY LVHKSGGKTT YTIDNENQI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.39794
Match: 1ekrA
Description: Molybdenum cofactor biosynthesis protein C, MoaC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.35299167495383 bayes_pls_golite062009
binding 0.752159827592538 bayes_pls_golite062009
protein binding 0.0497438994771057 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle