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View Structure Prediction Details

Protein: egl-9
Organism: Caenorhabditis elegans
Length: 723 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-9.

Description E-value Query
Range
Subject
Range
egl-9 - status:Confirmed UniProt:Q565A4 protein_id:CAI79248.1
564.0 [0..1] [723..1]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAPNDDCE IDKGTPSTAS LFTTLMLSQP SSSTAVLQCT YCGSSCTSSQ LQTCLFCGTV  60
   61 AYCSKEHQQL DWLTHKMICK SLQTSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 2od1A
Description: No description for 2od1A was found.

Predicted Domain #2
Region A:
Residues: [87-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPSNLMPQA APAVMAPIPP TVSFDDPALT TSLLLSLQNN PILNQTISNF PPTFSITSKT  60
   61 EPEPSIPIQI PQRISSTSTV PFSSEGSAFK P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [178-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRNTHVFNSI SSESMSSMCT SHEASLEHMS SASLAMFPTS STAQSDISRL AQVLSLAGDS  60
   61 PASLALVTTS VPSTASTATI PPPATTTSSA TSSGKSETIT VGKEKIIQTD DPDIQIIETE 120
  121 GGSKPTVSRT RKRPTPSNSA DPKINYKDHN KNVVYSTTLQ EHQKHLQNRG LA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [350-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSIHQAMVLR LRYIAEHVIR SLNEFGWAVV DNFLGSDHYK FTAKEIERLY ERGLFSPGQL  60
   61 MEAKHKDEFH IKDIRSDHIY WYDGYDGRAK DAATVRLLIS MIDSVIQHFK KRIDHDIGGR 120
  121 SRAMLAIYPG NGTRYVKHVD NPVKDGRCIT TIYYCNENWD MATDGGTLRL YPETSMTPMD 180
  181 IDPRADRLVF FWSDRRNPHE VMPVFRHRFA ITIWYMDKSE RDKALAKGKE SDAACASKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.0
Match: 2g1mA
Description: No description for 2g1mA was found.

Predicted Domain #5
Region A:
Residues: [589-723]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENDPTSSSLN SLIGSLLRPR KNPSTHDLSK LDLRLFPSTS SDPALVSAAD EDRVDISADF  60
   61 QSTSSLAHPE STDSGVSLST FNVAHNHMER TTSLQSISDH FRSERSHERR SSTSSDQDLD 120
  121 EGLPPPPSTN PEYYI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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