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View Structure Prediction Details

Protein: CE27743
Organism: Caenorhabditis elegans
Length: 232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27743.

Description E-value Query
Range
Subject
Range
gi|50306287, gi|... - gi|50306287|ref|XP_453116.1| unnamed protein product [Kluyveromyces lactis], gi|49642250|emb|CAH0021...
gi|49642250 - gi|49642250|emb|CAH00212.1| KLLA0D01023p [Kluyveromyces lactis]
230.0 [0..1] [205..1]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKRLKRAN RLLTFYKYNY KFVAPYRVLV DGTFCNAALQ EKLNLAEQIP KYLTEETHLM  60
   61 TTNCVLKELE KFGPLLYGAF VIAKQFEIAE CTHSTPRAAS DCLAHLARRA ASGKTKYLIA 120
  121 TQDDELTEKL RAIVGTPIMY IKFKTVLLDN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.221849
Match: 1o4wA
Description: Hypothetical protein AF0591
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.845290320008287 bayes_pls_golite062009
hydrolase activity 0.31554871338907 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.12799711467808 bayes_pls_golite062009
nuclease activity 0.0878151841480506 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [151-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISEATKAGCS KEESEIKKLK ELKNALIGQQ ELKKKKKKKG VNPLSCKKKI MKASVDIVRT  60
   61 GERTASGKRK RTKKKGSSMD EE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle