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View Structure Prediction Details

Protein: CE27713
Organism: Caenorhabditis elegans
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27713.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
401.0 [0..4] [330..1229]

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Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMVIPARNQ MASQFLELPK RTSSLMAPTM VLQGHGGEIY TSQFSSDGSF LASAGYDQQI  60
   61 FLWNVFGECE NFAVLKGHKG AIMEVKFNAD SSHLVSAGTD KTVRVWDMET GSCIRNFKSH 120
  121 TDIVNSVDVN RRGPQMICSA SDDGTVMVHD MRSKEAAKKF ICKYQQTAVT FNDAADNVIC 180
  181 GGIDNQIKVW DMLRNDVRYV LSGHRDTITS LSVSHNGNFL LSNSMDCSLM SWDIRPFVPA 240
  241 QRLVARYQGA SHNFEKNLLK CGWSPRDNYI TAGSADRFVY VWNAKSRACV YKLPGHLGSV 300
  301 NCTALHPTQQ ILLSAGSDKT IFLGELDLED Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.0
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle