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View Structure Prediction Details

Protein: CE27707
Organism: Caenorhabditis elegans
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27707.

Description E-value Query
Range
Subject
Range
gi|32816615 - gi|32816615|gb|AAP88588.1| putative zinc transporter [Oryza sativa (japonica cultivar-group)]
182.0 [0..6] [358..49]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQFLFMTTS AFAVFILLLI STSIPYTFLR TCCVNASKTS ISFLGCASCG VFIATCFLGL  60
   61 VPHVRHQEMH LRGNQTIVDS YGWIPSTDQL VIIGFLIILI TEQIIHGIGH SIGNGHSHSG 120
  121 HSPLATSDSI KMNKFHDEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGEDHVPLVA MDDDADEIIF RQNTSPHHHA PSSGHCRTAP GGSMNIRVWF LLLGMSVHSF  60
   61 FEGVALGVQN DSNAFWQILI AVLFHEVLCC VSYGVQLAKH NASRKYAWTS SIFLSATIPA 120
  121 GMILATTIDG IENDMWQRIG RYWLEGLAAG TFVHVALVEL LPMELHSDDS GEGGHGHSHN 180
  181 VIADTTHSHS NHSSSHWISL VKSLFVAAGI GIFVIIKSLI GEHH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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