Protein: | cln-3.3 |
Organism: | Caenorhabditis elegans |
Length: | 417 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cln-3.3.
Description | E-value | Query Range |
Subject Range |
|
330.0 | [0..4] | [410..261] |
Region A: Residues: [1-417] |
1 11 21 31 41 51 | | | | | | 1 MMDRVNWPTV RIAVAFFLIG LCNNYGYVIM LSAAEDILSE QHGKVKSNAT DLCLPAITKR 60 61 ECKPPVAEVL LSDNLPSLIV KLTFPFFMDR FPFGFRVAIV CLLQATSYFV VAFSVSIPMS 120 121 LAGVVFVSLG GGLGEITFLG LSAHYQRIAI AGWSSGTGMA GLLGSFSYAF LTEPHMANLT 180 181 PKVALLIQLF IPVLFAFAYF ILLKKPESVY SPTLDPKSWI VPKGYDDFIV SEHRVPQREL 240 241 GPSDRLKLIL PMLHLMIPLA IVYVGEYMIN QGMTQQIVFD CAHGFNLSLH SQYRWYQVLY 300 301 QFGVFVSRSS IRLVELPMWM LYLLPFLQLT NMLFFFFDAL YWFVPQIAII FALIIFEGLF 360 361 GGSSYVNTFH KIHNKVEPDV REYCLSAASM GDSIGVNFAA GVSIPLHYWM CDQPARL |
Detection Method: | |
Confidence: | 8.045757 |
Match: | 1pw4A |
Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
binding | 1.89539096965643 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
hexose phosphate transmembrane transporter activity | 0.901989724654833 | bayes_pls_golite062009 |
glucose-6-phosphate transmembrane transporter activity | 0.901989724654833 | bayes_pls_golite062009 |
glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |