YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE27638
Organism: Caenorhabditis elegans
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27638.

Description E-value Query
Range
Subject
Range
gi|187031783, gi... - gi|39593263|emb|CAE64733.1| Hypothetical protein CBG09520 [Caenorhabditis briggsae], gi|187031783|em...
gi|157763464 - gi|157763464|ref|XP_001674074.1| Hypothetical protein CBG09520 [Caenorhabditis briggsae AF16]
389.0 [0..1] [407..7]

Back

Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETYANFTF IDCSIVSASR FGNASLCPKA TKYGKRPPKS CTRPTDPNNL PASKLESWFT  60
   61 REMFEDLFPF SNLGWGPSSC WPYSYDAFKI ASRYFPEFGT SINVNNKEAV RSDASNCFYR 120
  121 GGFYNWFEGG PISSFLDPKT PGYTPSDGNS CSSAGLYCSA SDQITYFYPC SNSTVSNTAA 180
  181 PYKGCYFGRG AIQISYNYNY GQFQDWLRTV NIKVDLLKEP NLVMTKMDPP LAVLASLWFY 240
  241 MTPQPPKPAM HDIVMGNWNS GAKNAAAGYD GPIFGPTSLI INNECSGEDP TNPGGPGESR 300
  301 RIKAFKWFNG YFGSPVGPEH TLSCKMKLDA ISHNLSYQPN WLTSWKEEPC DCAPASYGGL 360
  361 VNYYDPVYYP AKFAAQNEIN RKKCIKSIYA KPSMYSMDKK TSACLNH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 2dkvA
Description: No description for 2dkvA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle