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View Structure Prediction Details

Protein: CE27565
Organism: Caenorhabditis elegans
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27565.

Description E-value Query
Range
Subject
Range
gi|60468186 - gi|60468186|gb|EAL66196.1| hypothetical protein DDB0204910 [Dictyostelium discoideum]
gi|66812030, gi|... - gi|66812030|ref|XP_640194.1| hypothetical protein [Dictyostelium discoideum AX4], gi|60468186|gb|EAL...
165.0 [0..4] [335..186]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTVKRQKV GHGIEIDREN EQSSNPIIRV ICSVQLISMI AVTAHSTAMP FLVRIANKTH  60
   61 FLPTTSVFMM EVLKLGFCLI ITLFKSGSIK K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCHELHKTIW QNRLETMKVA VPAVVYAIQN NLYYIALANV DPTTYSVTLQ IRILTTAALS  60
   61 VCLLNKKLSW YQWGAQVMAL LGVVIVQLDK TNSH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.14
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [186-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEAVGNFWIG VSAVVGMCWT SAFAGVYFEK MLKNSSADVW IQNIRLSILT LFFAGITMIT  60
   61 TDGEAVFGGR MFEGWSNMVW LVTILNSVGG LCISLVMKYA DNVMKTYCQS IAIGLTSLVS 120
  121 ICLGERILTV YLVYGVTLVT SSVVVYSLFP VAPPALSDYH KLEQQDDVAE LLKSSGVEDE 180
  181 EEEEDEIFGE LEHKIEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle