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View Structure Prediction Details

Protein: ain-2
Organism: Caenorhabditis elegans
Length: 706 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ain-2.

Description E-value Query
Range
Subject
Range
ain-2 - status:Partially_confirmed UniProt:Q86GT1 protein_id:AAO61448.1
342.0 [0..310] [706..1]

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Predicted Domain #1
Region A:
Residues: [1-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGDGWQGPG RGGPHHMNGG GGGRRGGGGG MHNQRIQQNP HHGGMNRMMP HGFRPQQGQF  60
   61 MPQYPPPPPM GGMPDVMDIN MRMDGMSLGS TPSGIPGQYG DMGPPPVQQW NQPAPFVPPP 120
  121 QQDDLYDPSG YGGGAGGGGG HHPSHMPPYG QRGNNQNQYG NRMQGGQGGY RGNQQRQQQQ 180
  181 QPQQGFNMPP MMVPPGQPPF YGGNQPNHHH QQPSFAPSPF SMGGGGGGSQ GGPHEQHGPG 240
  241 GNQNGGFGVS SSSMDDYSMW TDENDEDAKK KKSLRDKGLS GWGDADVSNS KPIRRWIVPE 300
  301 GQEEDFETAM ERCPSHLKKK ALNEEALRRR LTSENPQIVA QAQQQAEEEA NAMMRIGRRP 360
  361 IVPSGWGDIP SEISTDKSDS EFDQSSSRGW DEGSISGGGS GRHPSHHQSN DNSMWNSPSV 420
  421 GGGQSNSETR NPFFAQHMQQ QQHQQQHQPH YGGYGDNGVL DGGSLWS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #2
Region A:
Residues: [468-706]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAVMDGSSMV PPHPTMGVGS SASSSSIPIG MLMMSGSGNV GGGPPSSSSL LDEDGSQKKL  60
   61 AENLKLAVQK GHLDISLLSL PHIPPNVLDL LTEILAVIPR LDDYEDELKK LGENRPSNYD 120
  121 EGASKEEKES WMSKDQKNDH DKAVIGVVTA KIEVTQLSKK ITEALIEAGL LPPQPQTSTS 180
  181 ANTSTNHLNH RGGPPPGSDG GAGPSTSRSG GGGAAGGDSF NSSGGGGPPD HYYDYSFLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle