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View Structure Prediction Details

Protein: CE27498
Organism: Caenorhabditis elegans
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27498.

Description E-value Query
Range
Subject
Range
gi|114618949 - gi|114618949|ref|XP_001145800.1| PREDICTED: N-acylsphingosine amidohydrolase (acid ceramidase) 1 iso...
356.0 [0..11] [349..154]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLQIILLL LPVICSAGDR KPRHYEINLD EPPSQRWNQV IKDHLEYLPG VVEETKKYIP  60
   61 KPLQPFVWWA ASKIDRYFTT EIQEELKGIA SESGLPIGEI VGMNILYDVA AFDRRHIFGL 120
  121 G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CTSIVAQNSA GQIIHGRNLD YDMTELLKNI TIHVDFVRNG TIQYSGLTFA LYNGVLTGQR  60
   61 PGEYSVSLNA RYSGAYIDNI LMEFYTKFKR PVSFFIRDVL ENQATYTEAV DAFSRTHLFS 120
  121 PSYIIVAGIK KNEGVVISRN RWSAANVYPL NVDANQWFLV ETNFDNWKKQ GDDRRITAIQ 180
  181 KLKELGRRNF DEKSMVEVLS TVPVRNNLTV FSTVMVPGLP DSADYFRQST WILP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 2bjfA
Description: Crystal Structure of Conjugated Bile Acid Hydrolase from Clostridium perfringens in Complex with Reaction Products Taurine and Deoxycholate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle