| Protein: | CE27449 |
| Organism: | Caenorhabditis elegans |
| Length: | 429 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27449.
| Description | E-value | Query Range |
Subject Range |
|
|
315.0 | [0..15] | [427..2089] |
|
Region A: Residues: [1-429] |
1 11 21 31 41 51
| | | | | |
1 MINSLLVYSL IPFSFLLAAD NTENATTSAE FLLPTRRTPP AKPQHGVDFL GPLWLSRTYK 60
61 ITCCRRGSPV AENPQLVSNW TETASDYAVD EKLVGTEQDD HCRVFQGTFL LSAAALYNST 120
121 FVSYGVQCKC PDAEQQQLDQ HCRQLPACQN GGYRSQSIGR RCSCPQPYFG EYCEKLCDQG 180
181 QVLAGIDGNN YCSCLPFYQG ETCSDLVCLN GGHEFRGRCS CPHNFVGYHC EIDTNKTKSN 240
241 SRYTKYGPQT NAENGELFSR DISGTVFSLV MIVVLVVSMY LLMKHRMQVQ SQYTSSRREE 300
301 MNRAAQIYGI ERGGAGTTTI SRDDIRILPF VAAGIQPPPP YAVSRTARRE ALPPLPSYED 360
361 ATKDTVIGAA ATVIEMQATT PTDASLQSPP AAHPDHSDVP DIPSSSSPPP PFDSEPPTIQ 420
421 RNVSTRRSL
|
| Detection Method: |  |
| Confidence: | 5.39794 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
