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View Structure Prediction Details

Protein: inx-8
Organism: Caenorhabditis elegans
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-8.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
385.0 [0..2] [372..1]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSVPFLTSL TSHLGITAID DASDTLSCLI TAFLFITAAI LTSAKTYVGS AMECWLPQTY  60
   61 SGDWGEFAEN YCFLKDTYFY PRQQSMTDIP MYHKERHRLT YYQWSSMYLA VAGIAFMIPK 120
  121 FLWRLSQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [129-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTDMPVVYFC DTANEIKNET EDKRSAKIKE MARFMRTKIT SVHTPSLFSF IRMYMVYSVI  60
   61 KILYLVNAIA QFVIIAIFLG QKRNLFWGWT LFMNLLNGIT WETTGLFPRV TFCDFQVREM 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [249-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGNNRDETVE CVIGINEFNE KIFLFFWFWL VFLVFSTLIA HFYNAAQIVK PYFIHSLLFA  60
   61 IRDHDIVDQK ELFREFGEKY LTMDGKLILS FVKSQSDLVA SEVAVEMYSD FLEARDRANI 120
  121 AEDKYNNILK NGKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle