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View Structure Prediction Details

Protein: CE27361
Organism: Caenorhabditis elegans
Length: 509 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27361.

Description E-value Query
Range
Subject
Range
CE15359 - status:Partially_confirmed UniProt:O17019 protein_id:AAB69952.1
469.0 [0..2] [505..10]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVPENVIL NFSIRFLKAV LVVFSVSILL ILICFSNTIF SQEDFFEITT PASIEILAVE  60
   61 TMPETSTSSF HLSSTAAPAP HSQDYQIFPQ NSSDCPFEEW NQIRTESIPN TELHKKWLEK 120
  121 WKSSFKYLYH KLPSVFAAFV HEEQIIVTLT SENQVNKTVY CRYFDCRRRE IVDPFKSFIF 180
  181 TTGTVFCARR PGAKFITVSK SLNETLEYPV PIVPR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDKPPHYFTV CMATLYGSEP KFLQIVDFIE YHKLQGATFF HVYVKNVSNY DRMLLDSYIK  60
   61 TGEIEIITLN DHFWRADYMW HNGQINDCHH RSKYFSKWTA FIDIDERLEM NNNKFTRVAV 120
  121 YLDTIQDSFI ANLHFRVKWV MKHKYTPERY KTEAQLKREM LFHKYQNISQ IGAIW

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.08
Match: 1h7lA
Description: Spore coat polysaccharide biosynthesis protein SpsA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.2097350467072 bayes_pls_golite062009
transferase activity 0.75347715535193 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [391-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQPKCIIRPE NVGIMSIHGP REMYEGEQIT LVEEDTGFIR HYRNVEQKIF RGALKIMMSH  60
   61 APFNFSSIDG GVKKVLTNNI IKRVKWVYDI KQPTCQEKVK MINIESKVAP CDNSTLRMA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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