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View Structure Prediction Details

Protein: CE27357
Organism: Caenorhabditis elegans
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27357.

Description E-value Query
Range
Subject
Range
gi|187034390, gi... - gi|39593854|emb|CAE62147.1| Hypothetical protein CBG06193 [Caenorhabditis briggsae], gi|187034390|em...
gi|157755687 - gi|157755687|ref|XP_001670187.1| Hypothetical protein CBG06193 [Caenorhabditis briggsae AF16]
495.0 [0..1] [409..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNLILFGAL VSTACSFKFL ENAQTYLSGN ADASVSAGSS GSNFLSGLQN SSFGQAVMGG  60
   61 INTYNQAKNS SGGNWQTAVA NSSVGNFFQN GIDFFNGMKN GTQNFLDTDT IQETIGNSSF 120
  121 GEVVQTGVEF FNNIKNGNSP FQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDASSVMSQF VPFLANASAE AKAEFYTILP NFGNMTIAEF ETAVNAWAAK YNLTDEVEAF  60
   61 NERSKNATVV AEEHANVVVM NLPNVLNNLK AISSDKNQTV VEMHTRMMAY VNSLDDDTRD 120
  121 IVFIFFRNLL PPQFKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 51.853872
Match: PF02520.8
Description: No description for PF02520.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [279-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKCVDQGNFL TNMYNKASDF FAGRNNRTDG EGSFWSGQGQ NGNSGGSGFS SFFNNFNGQG  60
   61 NGNGNGAQNP MIGMFNNFMK KNNITADEAN AAMADGGASI QILPAISAGW GDVAQVKIGG 120
  121 DFKIAVEEET KTTKKNKKQQ QQANKNKNKN KKKTTIAPEA AIDANIAAEV HTQVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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