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View Structure Prediction Details

Protein: ztf-23
Organism: Caenorhabditis elegans
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ztf-23.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
614.0 [0..1] [414..2430]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGYPIVFRC CECTVEEQTM EHLESHIWSR HLQAFPFKCA YCDFPALSAI SLMDHFAQNH  60
   61 SDVAIVEFKR NLEDEKRFRK MVADSIAIEI DETSQQDSST QMTVLQPMMQ QGTAQMILLP 120
  121 PEGSQYDEIV DHRGPDEDDF GVLDDDENIE ELIDDDDDDD YIDELGNPVF IGAHDDSDYI 180
  181 LEDDLSPQGP IRSSNNYHLK YIRTRRMDKL IDNVVVNATQ RDSPEQEDCS TSGVAFADGQ 240
  241 TN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.41
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #2
Region A:
Residues: [243-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGKMGRFSCD RCSRTFKYQS KLDEHRRTHL GVKPFQCHYC TRQFSQRGAL KTHMRLHTGE  60
   61 RPFVCQWECG KQFASSSAKS HHEKTHSGER PYICNVCGKS FTKNSHVIRH LKNIHNRELA 120
  121 QQDAMLRGDD VQSTDESLNI GSARSQMSDI EPRGKEIGVV HDIVEQIHEE RKDFMRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.154902
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle