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View Structure Prediction Details

Protein: CE27216
Organism: Caenorhabditis elegans
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27216.

Description E-value Query
Range
Subject
Range
gi|157770238 - gi|157770238|ref|XP_001676939.1| Hypothetical protein CBG10845 [Caenorhabditis briggsae AF16]
gi|39586714, gi|... - gi|39586714|emb|CAE65756.1| Hypothetical protein CBG10845 [Caenorhabditis briggsae], gi|187030638|em...
208.0 [0..1] [518..1]

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Predicted Domain #1
Region A:
Residues: [1-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNSQLFCAN HAYHVQQTGS AGGSRTRRTK TIEKLPDKVL RDIFQYLSPK QINQVGLVCK  60
   61 RWRVTSQNPL LWKFVSFRPN YGGIQVNPQC IDHFIQLIGT RFSELRIVEL ATDLITPNVL 120
  121 YELANKAPKL QYLTLDFSTA MQLHDFTDLQ SFPSRLKSLT LCLSENIFLE GFLRKVYTFI 180
  181 SSVETLHIIG TYEKVEDEEE EVYETVNVFK LKQFLPNLRV VNLWGVPFIT DEHVDAISSN 240
  241 CAHLECLCVN YCPKVTGSCL KLVLQRCRKL KTLFLAHTKL DNNIVKMVDW EKTRIEELDI 300
  301 KGTELNSDAL ISILTRLPHL RWLDASWLEC MTDQVLEAWQ NSNAMGSLQF LNMDTCDSIN 360
  361 EQALVDMIKR HGHQFHGLCL GGQHKLLEYF WMNMIPQLRN IRVMVMGIAE DCCPKVVAKI 420
  421 HVDQFVDCIA QNCPRLTRLE VRWDDETLRF SDKSSKFIDV LRMKCLMLHS IVLSDGQYYE 480
  481 LVRSNFERAD RMSVVRTTEM CRTGLLHCSR YFNKLLFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle