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View Structure Prediction Details

Protein: CE27215
Organism: Caenorhabditis elegans
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27215.

Description E-value Query
Range
Subject
Range
gi|55770563 - ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group...
gi|115434762, gi... - gi|55770563|ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...
217.0 [0..22] [533..211]

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Predicted Domain #1
Region A:
Residues: [1-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAIYDMTRR VTMHDVNSEP DYDDMDPDMK DFFTDSNQQY YTERNQYTIE KLPDKVLRDI  60
   61 FQYLSPKQIN QVGLVCKRWR VTSQNPLLWK FVSFRPNYGG IQVNPQCIDH FIQLIGTRFS 120
  121 ELRIVELATD LITPNVLYEL ANKAPKLQYL TLDFSTAMQL HDFTDLQSFP SRLKSLTLCL 180
  181 SENIFLEGFL RKVYTFISSV ETLHIIGTYE KVEDEEEEVY ETVNVFKLKQ FLPNLRVVNL 240
  241 WGVPFITDEH VDAISSNCAH LECLCVNYCP KVTGSCLKLV LQRCRKLKTL FLAHTKLDNN 300
  301 IVKMVDWEKT RIEELDIKGT ELNSDALISI LTRLPHLRWL DASWLECMTD QVLEAWQNSN 360
  361 AMGSLQFLNM DTCDSINEQA LVDMIKRHGH QFHGLCLGGQ HKLLEYFWMN MIPQLRNIRV 420
  421 MVMGIAEDCC PKVVAKIHVD QFVDCIAQNC PRLTRLEVRW DDETLRFSDK SSKFIDVLRM 480
  481 KCLMLHSIVL SDGQYYELVR SNFERADRMS VVRTTEMCRT GLLHCSRYFN KLLFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.045757
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle