| Protein: | tlf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tlf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
330.0 | [0..259] | [442..3] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MQMGDHQMMG NQRTYVQKVM PAQAGGAVSQ NATYVQTAGI RTVHHDGNGQ QRIVQLPPGV 60
61 RQIQQNGVGP AYVRQVPGGQ PMQVNFGHPG TIAGRNVAVG VQMRPVQGHN VQQGYQRQQV 120
121 ANQIQQQNRA VFMAQNQQGQ QQ
|
| Detection Method: |  |
| Confidence: | 8.221849 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [143-250] |
1 11 21 31 41 51
| | | | | |
1 ISYAQAQHRQ QQQNQQQHHQ QPQHFNHPSQ QNQMIMQHRQ PQMHHNQQHQ MVQPQMTRHQ 60
61 MAQHHAQQPH PQIYVPRDMN LAVPLREPSP EPIPVKIEVP DVPPEGTS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [251-505] |
1 11 21 31 41 51
| | | | | |
1 AANEEPMPDD GDIDIQIRNV VCNYTLPLHI DLRKLAMNTH NVTYEREKGV MMKQKRSPGC 60
61 YIKVYSSGKV YIVGCRSEAD CKRAARSIAR HVQRVMGKTK ERVSIRNYRV NNVLATCRLP 120
121 FGIKIEEVAA KYPSESTYEP ELSVGLVWRS VTPKATLRIH TTGSITVTGA QSEADVLEVL 180
181 SKIYPIVLEF RCLERAKGNV AAQKKRKRKA PVNRGPPIKR ERFDDSNYRN SGVINNQVYF 240
241 SDEDEDLYDE LDLEE
|
| Detection Method: | |
| Confidence: | 90.39794 |
| Match: | 1jfiC |
| Description: | TATA-box binding protein (TBP), C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
