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View Structure Prediction Details

Protein: egl-44
Organism: Caenorhabditis elegans
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-44.

Description E-value Query
Range
Subject
Range
gi|109462707 - gi|109462707|ref|XP_001078008.1| PREDICTED: similar to Transcriptional enhancer factor TEF-1 (TEA do...
613.0 [0..37] [457..17]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSMFCSELQ QALPQMSEDV AVTAQTILNG TPPHNHFRKE WLAGAAGTTT PTTTSGGQMM  60
   61 TLSPPAGDGP GSAGSMAPES TSSLSD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSGDAEGVWS IDIDQAFQEA LAIYPPCGRR KIIISDEGKM YGRNELIARY IKLRCGKTRT  60
   61 RKQVSSHIQV LARKKLRDEQ AKKKGDIPSL LQQASPPGGV KS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.0
Match: 2hzdA
Description: No description for 2hzdA was found.

Predicted Domain #3
Region A:
Residues: [189-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSAVVFPPVS AAVAAITEIS PQSSYSSIVP KVETDQISQQ LFKSLPLWSF QQTPGLLSEW  60
   61 IYHNLFSNNP LPTKQFHLFS AYVKCNKTSL RTELVKIENT LEKD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [293-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIDISVFYEK YPKLLRELFE KSEKKDVFFL AKCWANINVS DDVQNCQYAV DSFYSSREKF  60
   61 QLKVSTMACS FGNQAVEKIE QYFPIEFDGS YSFILNNSPM CDYMVKFIAE LKKLNVIETM 120
  121 NNVLENFTVL QIVTNSETDE LLMVLCFVFE VSQEPEPSCS VYRLIDGGGD SDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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