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View Structure Prediction Details

Protein: egl-44
Organism: Caenorhabditis elegans
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-44.

Description E-value Query
Range
Subject
Range
gi|109462707 - gi|109462707|ref|XP_001078008.1| PREDICTED: similar to Transcriptional enhancer factor TEF-1 (TEA do...
613.0 [0..37] [457..17]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSMFCSELQ QALPQMSEDV AVTAQTILNG TPPHNHFRKE WLAGAAGTTT PTTTSGGQMM  60
   61 TLSPPAGDGP GSAGSMAPES TSSLSD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSGDAEGVWS IDIDQAFQEA LAIYPPCGRR KIIISDEGKM YGRNELIARY IKLRCGKTRT  60
   61 RKQVSSHIQV LARKKLRDEQ AKKKGDIPSL LQQASPPGGV KS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.0
Match: 2hzdA
Description: No description for 2hzdA was found.

Predicted Domain #3
Region A:
Residues: [189-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSAVVFPPVS AAVAAITEIS PQSSYSSIVP KVETDQISQQ LFKSLPLWSF QQTPGLLSEW  60
   61 IYHNLFSNNP LPTKQFHLFS AYVKCNKTSL RTELVKIENT LEKD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [293-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIDISVFYEK YPKLLRELFE KSEKKDVFFL AKCWANINVS DDVQNCQYAV DSFYSSREKF  60
   61 QLKVSTMACS FGNQAVEKIE QYFPIEFDGS YSFILNNSPM CDYMVKFIAE LKKLNVIETM 120
  121 NNVLENFTVL QIVTNSETDE LLMVLCFVFE VSQEPEPSCS VYRLIDGGGD SDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle