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View Structure Prediction Details

Protein: CE26989
Organism: Caenorhabditis elegans
Length: 690 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26989.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
347.0 [0..2] [685..1849]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANRTVTVF SSSAEDQEPI ELAEDSLQNL DKMLAEEKEE HQLLKDEVVL LRKENVEAKT  60
   61 YSTLLEIMLD EAEEKASSAQ ETTSEENNLK ILNRDLVAEN LELKEMKEEL RKIWLSDSKK 120
  121 FQEALTRISD ENTKLQKDCH ELESIRQCAQ FALDNCNEEL EKTQTENEEH ESRIETLERE 180
  181 VCEKDIAMKD IVERKDEISL QLELQTKEFT SALNDLMYGR EDTLKQIHQM KENWKVKQNE 240
  241 FEVEITKLKS QNDYFDSERL QLTDRIRALL NELSDVRLEL GSTRLAMKEK AEVTEAVTSF 300
  301 NK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.09691
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [303-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLRDKLEDEI ARLGECLQFR KDEHEQDEAV IAHLEEQLKL GSDKAAAFSS EHSDTIELLR  60
   61 ESETELMELR MENYDLKEDF KILKEEKEDV NRTCECLREQ LSTTIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #3
Region A:
Residues: [409-690]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERDIEKGQMQ SEMDAKMVAV HQQYAKQIDN MKYNHMLAIN QELIKGQMAL ESGKKKHANE  60
   61 ILTVRNELEQ SNAAHQSLRD QCSLLLSSED DLRTAHLALE SKMTLVSEEC IALRVSRANA 120
  121 QKEIGNLTEH HKLEVALLED AKSGIQQRLH YATIEIEQLK KINEVTQAQF KKETDEKNAE 180
  181 INEFQAAMVS MKQQYNVLGN HCRVLTSQGI SDRTTIDKLQ ETIREHTELA IETKRIHDAE 240
  241 IVQLNDAHKK LVDNLGVEEL DEEPKASTES EEKAEWEMVD EE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.154902
Match: 2i1jA
Description: No description for 2i1jA was found.

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Created and Maintained by: Michael Riffle