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View Structure Prediction Details

Protein: zfp-1
Organism: Caenorhabditis elegans
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zfp-1.

Description E-value Query
Range
Subject
Range
gi|630639 - gi|630639|pir||S44829 F54F2.4 protein - Caenorhabditis elegans
400.0 [0..8] [211..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRSVSMFL IDISLFLLLG TLIVACTVKK EKIKERHNHN RTLLKRTVGG KRKDTGHRHR  60
   61 TSTIPPRDKS SLHAPTVKNG NSLSAVEPNG RIKIGYRLSP SVKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEIVAPKATV TPAVNTRKPI NEAISEGIIL DPTYFKNGGN LDSKSPKNQK LAEELQQFID  60
   61 NPGLGSNETS TLTDDNDVPR VVAVPSQCKM FETTNQPTNS QLLLNSE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle