| Protein: | nfm-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 709 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nfm-1.
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..7] | [579..90] |
|
Region A: Residues: [1-531] |
1 11 21 31 41 51
| | | | | |
1 MGGFSIFSRN TKPIYAKVST MDADLEKIVI EKTWTGRHLF EAVCRIIGLR ETWYFGLQFT 60
61 NKKNIPCWLQ NDKTICGQDI QKDTSDGTFN FLFLVKFYPE DVEPEIILDA TRHLFFLQIR 120
121 EAILSMNLYC SPEASVLLAS FAVQAMHGDC TEEVGPIDLD KHLPKSVIDQ YDMSADMWRD 180
181 RIKRWWSRNA GQSREEAELE YLRVAQDLEM YGILYYPICN NKETDLHLGI SAQGLGIYKG 240
241 VNRITPRPFF SWSEIKNIQF KNRKFHMKTV DKSTISFRSR ETSIDSSILD LCIGTHNLYL 300
301 RRRQPDTLEV QQMRSQAKED KQRRAAEQAK VALERKERQQ MEKEYKEMKQ KVEVMTLELM 360
361 KAQENIRKAE EANDQLAEKA RHSEHETLML YKQKSEVEAE CNRLSMNNMK SEEALLRMER 420
421 KAREAEILAK QMSMSLADVS LDANRKMTQY SSQSALIIDP NWHQQVSGHQ SGHPGMPSTG 480
481 SFHQLQSLDT HTHPQQMMSR SLNMPSSAFS SPIPSNQPLS HQQPQQMSQN T
|
| Detection Method: |  |
| Confidence: | 59.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [532-709] |
1 11 21 31 41 51
| | | | | |
1 QAHQQQTQVQ NQNQPPYYGG SGMIIPPPDP SISQIFEQQT TLMELEKSRS EYETRARIFK 60
61 EHLEELRGDI DGLKRDGNVQ NGQHREHDAV HAQNVAHGFD KFTTMRMKKS KSASSIGSSG 120
121 SSDSLELNTV ARHVAGRGIP RVSTVSTTSS SSILSHVMML HRQQSYDLGN TEWQEADI
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
