| Protein: | mex-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 467 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mex-6.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..1] | [467..31] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MTATSNSAPL AGGSLSSSAT AQPPQPPPGH QQQHPLPQIY DSQMQYYYGS SMPNQPIPTY 60
61 TAQNGAPQQF GTPPYYQDAN GQFGQVPAQQ QMMTAGHPYF YMAQPQQGG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [110-269] |
1 11 21 31 41 51
| | | | | |
1 QHVAQSGQPQ IFYYQQPLGQ MAQQAAPMYF HPMQAASTPM LSEQMSMMPQ IQSTNPQQSE 60
61 QLRKSGAQIS TTRTVPLTSS TPLPTSREYE TVQRDRNRNS QSRYQCPIEH DDLPIDEISK 120
121 ITIDNHNDDT MSAEKENRFN KNRVEKLGRR GFAKPEVDSQ
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [270-386] |
1 11 21 31 41 51
| | | | | |
1 LPHNFKTRLC MTHAAGINPC ALGARCKFAH GLKELRASDI PTRYPNNKYK TKLCKNFARG 60
61 GSGVCPYGLR CEFVHPSDTE FQNIPPYQRK MVEEHDSIPE DYVVARYQPR FMHTSGK
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [387-467] |
1 11 21 31 41 51
| | | | | |
1 ATTPTKVTLK QRNVAGSMMC LSNTGRDLEA GGDFNHPEIN ENDLPPHLRR IRRGNPPVTR 60
61 SRPSFSTKWT SVENLGLRGH Y
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
