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View Structure Prediction Details

Protein: inx-2
Organism: Caenorhabditis elegans
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-2.

Description E-value Query
Range
Subject
Range
gi|7498657 - gi|7498657|pir||T20594 hypothetical protein F08G12.10 - Caenorhabditis elegans
416.0 [0..1] [419..29]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGFFGPLYE QLVGMLRKQQ GQLAFDTIDR VNAWFTPFVL VAMTLAISCK QYFGQPIKCW  60
   61 TPREFSGSWD GYVHDFCFIE NTYFVPNGTE VTDEARGGRH INYYRWVPLV LLFQAAMFVL 120
  121 PYHLWNLF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [129-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HKRTTINLKG SLRFFEGALK KLEPAQACES FAGEIWNRLS DIRNSSNKLY GFQATINYFL  60
   61 LKLGFIVNCI LQMVLLKHFL DVDDYFWGFF HLWNVEFKGT AEKEDSIFPR IVLCD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [244-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKVRNLGQQH QHTVSCIMIL NMIIEKLYIC FYFWLIFVFV VTTAGMIHFA FQILFRRHSL  60
   61 IPTNLNNKNK MNPTRSHEFI KDYLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [329-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDGCLLLTYV DAQFGAFRTS QVIDGLVHRF TNELDSDSSA VTSLNEDHPE RYVAFNTDTI  60
   61 PMDRYARKHH SLIEEVDGPS APPANEEKKE I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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