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View Structure Prediction Details

Protein: egl-17
Organism: Caenorhabditis elegans
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-17.

Description E-value Query
Range
Subject
Range
gi|114650543 - gi|114650543|ref|XP_001150157.1| PREDICTED: fibroblast growth factor 14 isoform 1 [Pan troglodytes]
gi|109121204 - gi|109121204|ref|XP_001093573.1| PREDICTED: fibroblast growth factor 14 isoform 2 [Macaca mulatta]
FGF14 - fibroblast growth factor 14
187.0 [0..10] [203..47]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKVLLTLML STNFRNTCAR FQIKPNVHYL GETHWQLFNE CSQGMLQSFL GSLNTRGYPD  60
   61 KHCLTDWNVV GEWDGKFRLQ HAQSRKFLCF NKRARITLRF NGSDAKCTFI EEVRDNGFSR 120
  121 LRSSWKPELY LGFNGRGRFQ NPLSYHLKPR CFDWIKLVRY VAESEKSVCS TPPKPKLSPS 180
  181 PLEHSSFVHH AVRSNFLKKV SATHDSLYRT MKSRKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.0
Match: 1ii4A
Description: Basic FGF (FGF2)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.207885057641751 bayes_pls_golite062009
protein binding 0.11345320970064 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle