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View Structure Prediction Details

Protein: gly-13
Organism: Caenorhabditis elegans
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gly-13.

Description E-value Query
Range
Subject
Range
gi|14388961 - gi|14388961|gb|AAK61868.1| N-acetylglucoaminyltransferase I [Cricetulus griseus]
477.0 [0..9] [442..15]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHAVTKIFII FIFVFILWTL YVENDITNRT RNTDNIDDLL ESANRLERLL KFEAKKIAAL  60
   61 AEDVHKIRAN RKGKHVIMEE MVSQDLKQWK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPIPVLVFSC NRAMAVRDHV EKLIRYRPSQ EKFPIIVTQD CDNENVKNEV KKFGDKVEYI  60
   61 KHLAGDKANI TIPPSHRQYT AYYRIARHYK LALNHVFVDK GYSSVIITED DLDISPDFFS 120
  121 YFSSTRYLLE NDEKLWCVTA WNDNGKQENI DMTAASTLYR SDFFAGLGWM MSSKTWHELE 180
  181 PIWPVGFWDD WMRDPARRKD RQCIRPEISR TGMMSYGKEG ASKGQFFSKH LAKIKVNDKY 240
  241 INFGKIDLDY LLPANFAKKT NLEVMKEAVE LSIDNVASFV LSSENKGKSV RVMYDGNIDY 300
  301 IRKADKLHIM HDFKAGVPRT AYDGIVTCFI NGIRIYLVPD RTKVSAYNPD WSVPPSFGE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 1fo9A
Description: N-acetylglucosaminyltransferase I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle