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View Structure Prediction Details

Protein: CE26347
Organism: Caenorhabditis elegans
Length: 174 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26347.

Description E-value Query
Range
Subject
Range
gi|39588364, gi|... - gi|39588364|emb|CAE72715.1| Hypothetical protein CBG19952 [Caenorhabditis briggsae], gi|187023740|em...
gi|157757263 - gi|157757263|ref|XP_001670975.1| Hypothetical protein CBG19952 [Caenorhabditis briggsae AF16]
236.0 [0..1] [174..1]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSAWKLDY TYSSKNCRTA DSNFNPPGFY STAATVQHSA EADRSADQHE HLARKRVWDT  60
   61 AMGPAKSLPM NMFMMYMAGG GVSIFPIMMV GMMVFRPLKA LFAVNSTFKP LESPATGSMF 120
  121 IHKLIFCLGN LGAIGLAIYK VHTMGLLPNT PSDWLEFIPQ PGRAQYSIID EVFI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.993
Match: 1yq3D
Description: Avian respiratory complex ii with oxaloacetate and ubiquinone
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle