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View Structure Prediction Details

Protein: CE26253
Organism: Caenorhabditis elegans
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26253.

Description E-value Query
Range
Subject
Range
gi|39589428, gi|... - gi|39589428|emb|CAE74457.1| Hypothetical protein CBG22199 [Caenorhabditis briggsae], gi|187022071|em...
gi|157745181 - gi|157745181|ref|XP_001667687.1| Hypothetical protein CBG22199 [Caenorhabditis briggsae AF16]
397.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRFYLLSSC ALLAFATSFC NAEKSQIRMP GVVPEADSYL CTSLELSDQE NYLTGFKALT  60
   61 TKGTAHHILL FGCEEPGSDE LVWDCGEMNK PDDEMPRAPT CGSKPAILYA WALDAPPLEL 120
  121 PQDVGFRVGG DSNIRHLVMQ VHYMHSKQEP DETGLEITHT EEPQPKLAAT MLLVTGGTLP 180
  181 RNKTESFETA CMIEEDVVMH PFAYRTHTHR HGKEVSGWLV KEDQKHEDHW KLIGRRDPQL 240
  241 AQMFVPVEDQ AMTIQQGDMV TARCILQNNE NRDISMGATE EDEMCNFYIM YWTDGEVMQD 300
  301 NTCYSPGAPD YKWAREADLN HIPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.09691
Match: 1opmA
Description: Peptidylglycine alpha-hydroxylating monooxygenase, PHM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.499354693747575 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle