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View Structure Prediction Details

Protein: CE26220
Organism: Caenorhabditis elegans
Length: 364 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26220.

Description E-value Query
Range
Subject
Range
CE15783 - status:Partially_confirmed UniProt:O17784 protein_id:CAB07352.1
343.0 [0..4] [364..5]

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Predicted Domain #1
Region A:
Residues: [1-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFHFLKFL TINNFSRYCL KIVKVHIIWI TIICIIYFNW RFKKLDFMAI PYPPAVIKFN  60
   61 TSAKYLSSNL ASSSQLGNNI FEIASLYGLS KHLNRTPLFF IENGYHKKML DNLRKTMPRL 120
  121 MEKFRILNGS VPRSISETKF QRACCLHKSP WSLEKNRDEY LHLSGKYYQS WKYFPNMRNE 180
  181 LIEFLNPTSI QIFGNLPISD DQNHVTCVHS RRGDFVEYLF YASDPKFMKN AVTFLNENEK 240
  241 VGSRNRKIVL FGDDLNFLET YFSDAVLSTD VGKNAEYYIS QNPPIDDFLY SKNNCDVVLI 300
  301 TAPRSTFGWW IGYFSKGNKV YYLDIKYTGD HIFESGGLIA SDFYPSHWTP LKFASANSFT 360
  361 VVRS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.32
Match: 2hhcA
Description: No description for 2hhcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle