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View Structure Prediction Details

Protein: CE26156
Organism: Caenorhabditis elegans
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26156.

Description E-value Query
Range
Subject
Range
gi|67903516, gi|... - gi|67903516|ref|XP_682014.1| hypothetical protein AN8745.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
220.0 [0..2] [433..32]

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Predicted Domain #1
Region A:
Residues: [1-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGISRETVN MLRVSTSFLI LFSAVLSHEF IAEPLFHGLS EANIGGIQAR DGYLMLCILY  60
   61 FTNTVSCFFA PFVVSRISGK WAMVLGMVAA FCMQAAYMFP NRYILMVTSA LGGAGATLLW 120
  121 VGQGQYITEN ISEANREKNT SIQWGFYKMS LIFGGVFFFF YFQNSSIDAI VANGQMQIFF 180
  181 IVFMTFTVLS IINSIFLPQS QVSQNQAILP FCETFVNSFK LLKTPRMFCF TIFFFYTGLI 240
  241 RSFWISIYPA CIKFTSQLST NTTAILTIGM IVTGCGQVIG SLSVAVIGNK IRKFGQHTLI 300
  301 LCALILHIFL CVMISLTFPN DAPLGHTDKN GPVFGASVLS AMTISALLGF GDAILQTQVY 360
  361 SYIAKYYQNE SSTVFSIFRF SSGIASTLLF FAAQYFHLMH HLILIAIFAV LSGLAVLRFQ 420
  421 KSSAAVSEKQ SEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.221849
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.557257328314518 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle