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View Structure Prediction Details

Protein: CE26137
Organism: Caenorhabditis elegans
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26137.

Description E-value Query
Range
Subject
Range
CE17407 - WBGene00007638 status:Predicted TR:O62065 protein_id:CAB03891.1
478.0 [0..3] [418..11]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTLRSSSR SRSNDSQCKT KLKIILIYIG ILIISAPIAY GLTVLTSNGS EPMSHENISY  60
   61 TPIRSRGDII PLNPDWGENY AKFTYDIISN TYSYKRHGGS SFEPYSVFNV QRVENRTLGA 120
  121 VYFKILIKGL LELWLEWKFD LKSEGKSIEK IVIKMEGIQE IADGNGIIKA CPYLLNICPK 180
  181 IPINQSLTIE KPTSDKLFIH INLDKDIKVF KADLKNGNKV ESFSIEVYWG VSDQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.87
Match: 2g9gA
Description: No description for 2g9gA was found.

Predicted Domain #2
Region A:
Residues: [235-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YFLSIYFYSP SEIIPLHPDL EDNYVKFTYD IISNTYSHKR QNGSSLEPYF VGNVKRVENR  60
   61 TLGVVYFEKI DKTIIGTILW EFGLKVVGKS IEKIVIKMNG MQEIDDYGES AAACQPSLNK 120
  121 CTEIQINDSL TIEKPSDQIA ISISMNEDIK VLKAELKEGN KVESFSVEVY WGELIFILSF 180
  181 KLTAVKVFQA LMREKYKLSK M

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.09691
Match: 2g9gA
Description: No description for 2g9gA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle