| Protein: | srw-38 |
| Organism: | Caenorhabditis elegans |
| Length: | 367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srw-38.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..11] | [364..95] |
|
Region A: Residues: [1-367] |
1 11 21 31 41 51
| | | | | |
1 MNSSKATDYV VPEEFRGDAW LTFSSWINSI SAYLYLTDFI ISFIGIFPSL FHFWVLTRES 60
61 MRHLTTNLFL IGMTLCGIIH MICNIIEFCP LLYNYYFSFE ISFECFPFAS YSKIVSNYYS 120
121 SMTNAVVTGM LTYFTVAMAI IRFLVVKFPF ARSMQRLIYS KSGLKILLPI IILILPLWIA 180
181 EISSTNIVET GIWVPGPNCD IFAENYTEKM YTVETSITFG IDDFYWIVYY IYAVIFQFIP 240
241 SILLPISTVL LIIELKKNKK TKTWTSKSQD RSTKLVVYMT ISFIMANAPY SLIYSLSFML 300
301 SAYARMIISQ LSVIAYLLTT LNVATHWLLC YFMSTQYRNT AREILGKNNI DSTVMVISYQ 360
361 TSRAKMF
|
| Detection Method: |  |
| Confidence: | 43.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
