| Protein: | sri-32 |
| Organism: | Caenorhabditis elegans |
| Length: | 321 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sri-32.
| Description | E-value | Query Range |
Subject Range |
|
|
179.0 | [0..8] | [321..162] |
|
Region A: Residues: [1-321] |
1 11 21 31 41 51
| | | | | |
1 MSIAFSPSFW LIAYYYSIGF ISLIFNVITI LLIVFKSYKL DSFKYYLLAY QVSCANYVLQ 60
61 LTILFQPMPL FPLLGGYCQG FLATYLGIWA HYMITINIAS AVIEVELLTI CFIMKQQSLS 120
121 LIINKHVIPE SLLYTGAGAF IYIPLSVFLT FRQITMSQED QMAYIATNHP EYHRNFEELQ 180
181 NFAIFHFNSW CYYLVVVTIS GGLFCGGAAI FTTADMFRMM KDLQTRVSRS SLKRYRATIQ 240
241 SLIAQLVVSM MLVVPLTTFV ALIFNKSEYA QAIAQFCLAI CALHSIVNAG VLILSTSQYR 300
301 NFLARKLPQP KFFKSSSIHV S
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
