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View Structure Prediction Details

Protein: CE25914
Organism: Caenorhabditis elegans
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25914.

Description E-value Query
Range
Subject
Range
gi|39589059, gi|... - gi|39589059|emb|CAE57791.1| Hypothetical protein CBG00814 [Caenorhabditis briggsae], gi|187038792|em...
gi|157760319 - gi|157760319|ref|XP_001672502.1| Hypothetical protein CBG00814 [Caenorhabditis briggsae AF16]
453.0 [0..8] [314..3]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHAKIFFVI ASVKFLMILS IHNYTQMSKT CKLRTVARKT VMEFEGVEDF IVPFVNYTKR  60
   61 FMVAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKKLISCTLR KSMSQLAENI MCLLYDEQQY FANSQSLNDT WKDERKCEHD RSYLNPSETL  60
   61 LNDTDTVRFA FIRDPFQRFI SFYLDKCVRE QKCYNCGNNM TCVLKNFYWG LKKVQRRWDG 120
  121 REQPEYVEIH AAPLSWNCDF YKDLSKWQLI PIGS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.968
Match: 2gnnA
Description: No description for 2gnnA was found.

Predicted Domain #3
Region A:
Residues: [220-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKTERSSAIT QTEKILRKQR VNETLVDMVV DGMKDGDTDH STYKSAHRLE AERQIREDPY  60
   61 IREMLHKIYY FDYVVFPFNR DSLDLKFQDT SCTIPLP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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