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View Structure Prediction Details

Protein: CE25907
Organism: Caenorhabditis elegans
Length: 213 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25907.

Description E-value Query
Range
Subject
Range
gi|25395974 - gi|25395974|pir||F88632 protein F56B3.4 [imported] - Caenorhabditis elegans
218.0 [0..1] [203..1]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLSKLCAG AVTQNVLKSY FLTPSQFRSF SRTITALEKS QKSPSKQEHA LQRSILEEVL  60
   61 VHEKAKPTTF GGKVAEKASN TFMYTAVVAG IGLIGAFIYV LAGEFFAQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSPQTIFNKA LALVRDDGRC QEIFGASIAG FGEETSRGRR RHVAHHKYEK DGMQRIRVLF  60
   61 HVKGDRDEGI AQAEMEQRDG DWQWRFLYVE NKRRPKTTHV LIDNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.69897
Match: 2ciuA
Description: No description for 2ciuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle