| Protein: | che-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 760 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for che-2.
| Description | E-value | Query Range |
Subject Range |
|
|
632.0 | [0..7] | [704..1165] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MKLKLSASRK TRHTEMVCGV GWIGTEAILS AADDHVFLLT NTATNESQQI LNMPETFFPT 60
61 SLHIFPRSQT KGGQNDVFAV STSDGKINIL SRN
|
| Detection Method: |  |
| Confidence: | 69.522879 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
|
Region A: Residues: [94-468] |
1 11 21 31 41 51
| | | | | |
1 GKVENMVDAH NGAALCARWN SDGTGLLSSG EDGFVKMWSR SGMLRSVLAQ FATAVYCVAW 60
61 DSTSSNVLYC NADHCYIKSL KMQVAPIKWK AHDGIILCCD WNPTSDLIVT GGEDLKFKVW 120
121 DGFGQILFNS SVHDYPITSI SWNTDGTLFA VGSHNILRLC DKSGWSHSLE KMNAGSVMAL 180
181 SWSPDGTQLA VGTAAGLVFH AHIIDKRLTY EEFEIVQTQK TVIEVRDVSS EVSRETLETK 240
241 ERISKIAILY KYLIVVTSSH IYIYSSKNWN TPTMIEYNER TVNIIVQCEK IFLVSDGMTI 300
301 TIFTYEGRKL INLNPPGQVM ALLDERKIDL ANDTLVVRDR ADNKVLHFFD PTTGKAQGDG 360
361 NLKHEHDIVE LTVNQ
|
| Detection Method: | |
| Confidence: | 12.30103 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.00272437879076 | bayes_pls_golite062009 |
| protein binding | 0.165161259478554 | bayes_pls_golite062009 |
|
Region A: Residues: [469-582] |
1 11 21 31 41 51
| | | | | |
1 CGPLNDRNVA FRDQIGAVHI AMVKTFGVSQ RMVKIGSLVE QLVFNDVTNM LCGISEGKIA 60
61 VWPLPNVAFH DRNLLQKSLI QKNIGSVGKF PQLANFAGNT IVIRKSDGCL LPTG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [583-760] |
1 11 21 31 41 51
| | | | | |
1 ILPFYGTLIT MASQSKWDQA IRLCRSIGND TMWATFAGLA VLHKNMIVME IAYAALEDDE 60
61 KVSLINEIKD KTDKETRQAM QVVLTGKLAD ADVLLERSGL SFRSLMLNIQ MFKWKRALEL 120
121 GLKNKQWLEI VMGYREKYLK NCGQKETDPL FLKHMSEVEI DWVHIRELIA AEKAKGNN
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 1hh8A |
| Description: | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.74713726824402 | bayes_pls_golite062009 |
| protein binding | 1.257655182369 | bayes_pls_golite062009 |
