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View Structure Prediction Details

Protein: CE25856
Organism: Caenorhabditis elegans
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25856.

Description E-value Query
Range
Subject
Range
gi|62088614 - gi|62088614|dbj|BAD92754.1| beta-1,3-N-acetylglucosaminyltransferase bGnT-5 variant [Homo sapiens]
248.0 [0..2] [345..11]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKARKILITV AILASLLAYR YYSQRTMEFL IEEDQMCLQR EWYESSQINS TADYGNSYQI  60
   61 SFSDVQSTFK WIHIPKIS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSPEILLIVL SRPDDFSRRN VIRHTWMSQE NEIKYLFLIG LGANMDGKIK EVVMAEAKLF  60
   61 GDIVVTSMED RYSKLSFKTL TLLLFGVSKV PSAQLIGKID GDVLFFPNLF LSTIKNENSM 120
  121 INVTSASVYG KIAEAGVPIV SNCCKRFLKY NFRRNSLISF GCTRYAFYLA GPFYLVTRSA 180
  181 ALRLLEASKH RNFHKIEDTL ITGVLADDTD VSRVQLHRIN LGQEKGTDLV FAWHSPLNDP 240
  241 EYKDLYYKTM SSQQFKEKLR LQEINVT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 2j0aA
Description: No description for 2j0aA was found.

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