| Protein: | CE25812 |
| Organism: | Caenorhabditis elegans |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25812.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..6] | [338..24] |
|
Region A: Residues: [1-216] |
1 11 21 31 41 51
| | | | | |
1 MQGRGGYHHG FDGPKRYRRD DNADPTNPNP SIVVHVRNLH QKVTEADLLE ALSNFGPVAY 60
61 ATCIPHSRMA LVEFEDIEGA KACVNFATSN QINVGGQGAL FNYSTSQCIE RMGFESATPN 120
121 KVLVVTVLNA QYPIDADVIY QISNAQGKVL RVAVMHKPTV VQALVEFESM EVAKAAKHAM 180
181 NGADIYSGCC TLKVEFAKPD RVRVQRQDKD QRDFTL
|
| Detection Method: |  |
| Confidence: | 33.522879 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [217-339] |
1 11 21 31 41 51
| | | | | |
1 PDNRRPYEDD RNHYDRHDYQ APSSYGYSSR GGGHSDYYGG DRGGPPHPPP SRYRDDYEDR 60
61 GYAQPAGGGP GCVMMIYGLE HGKINCDMLF NILCQYGNVL RVSSSRVYYL HVYILDQLHA 120
121 HKN
|
| Detection Method: | |
| Confidence: | 1.65 |
| Match: | 2adcA |
| Description: | Solution structure of Polypyrimidine Tract Binding protein RBD34 complexed with CUCUCU RNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.787118623292657 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0269483316710413 | bayes_pls_golite062009 |
