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View Structure Prediction Details

Protein: CE25595
Organism: Caenorhabditis elegans
Length: 169 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25595.

Description E-value Query
Range
Subject
Range
gi|218198975 - gi|218198975|gb|EEC81402.1| hypothetical protein OsI_24632 [Oryza sativa Indica Group]
gi|222636316, gi... - gi|50933753|ref|XP_476404.1| putative ferredoxin [Oryza sativa (japonica cultivar-group)], gi|331464...
144.0 [0..2] [169..17]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVLRLAMR AKGFSRFLAE TQAFPVKNRH FMTSSVRKTG DFEYEDPKSE DEVVNITYVL  60
   61 RDGTERKIRG KVGDNVMFLA HRYDIEMEGA CEASLACSTC HVYVDPAFQN KLPEPLEEED 120
  121 DMLDMAPALK DNSRLGCQIV LTKELDGITV TLPTMTRNFY VDGHVPKPH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 1i7hA
Description: Adrenodoxin-like ferredoxin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
electron carrier activity 0.977024239198829 bayes_pls_golite062009
oxidoreductase activity 0.12689037681325 bayes_pls_golite062009
binding 0.084952480336813 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle