| Protein: | smg-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 458 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for smg-7.
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..2] | [308..153] |
|
Region A: Residues: [1-458] |
1 11 21 31 41 51
| | | | | |
1 MSDEWEQLTV ELRKIPRGTE AAPQYLRHLM KMFVADFETA VSKRFDVKFW NKLKSMMDEI 60
61 TKAMENDRLV NHNVQNLAIG FLTDLSLLVH YHYEIPNYGN DISKQLTWTP DVFLNRKPIK 120
121 SKKNSRVFMA YVLLRMGDLM RYKENYPKAQ EYYEQSCRIN PADGAVWNQL GLISSLGAKN 180
181 LESVYFHTRA LHATMEFPTA SGGLTNIFKN FANRDISRPM PIKDLYLSCL GRIHFLLEIE 240
241 DSSVHLQKIG EEAATSKEMI VPLMSVYKHL EDGTELEQRA VEYVKTIWCT AYRSLLKTLD 300
301 DYKEESKKLA DVPHLLHILA LLLCAPKLLR GIEDQTEDEV TSICEWLLCA NCDEKIKDSD 360
361 AFGYFHCLQR IQYPLTRTQL AQKLVEIEDE DESKDSDQST IPEEDQKSLS TDTSRIQNED 420
421 SEPESESESS DEEVLQRGRR RGRNPNLDES VETDEDEF
|
| Detection Method: |  |
| Confidence: | 42.39794 |
| Match: | 1ya0A |
| Description: | Crystal structure of the N-terminal domain of human SMG7 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.787280988128024 | bayes_pls_golite062009 |
| protein binding | 0.212989569759479 | bayes_pls_golite062009 |
| hydrolase activity | 0.142615944899055 | bayes_pls_golite062009 |
