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View Structure Prediction Details

Protein: atg-3
Organism: Caenorhabditis elegans
Length: 305 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atg-3.

Description E-value Query
Range
Subject
Range
ATG3_DANRE - Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio GN=atg3 PE=2 SV=1
403.0 [0..1] [305..1]

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Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNLVNNLKS AALQIGETFT PVLRESKFRE TGVLTPEEYV AAGDHLVHHC PTWKWAGASD  60
   61 PSKIRTFLPI DKQFLITRNV PCHKRCKQME YDEKLEKIIN EEDGEYQTSD ETGWVDTHHY 120
  121 EKEHEKNEEK EQSTAPPPAA PEDSDDDDEE PLDLDELGLD DDEEDPNRFV VEKKPLAAGN 180
  181 DNSGEVEKVR TYDLHICYDK YYQVPRLFLM GYDENRRPLT VEQTYEDFSA DHSNKTITVE 240
  241 AHPSVDLTMP TVHPCKHAEM MKRLINQYAE SGKVLGVHEY LFLFLKFVQA VIPTIEYDYT 300
  301 RAIKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.154902
Match: 2dytA
Description: No description for 2dytA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle