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View Structure Prediction Details

Protein: CE25462
Organism: Caenorhabditis elegans
Length: 213 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25462.

Description E-value Query
Range
Subject
Range
gi|157759459 - gi|157759459|ref|XP_001672073.1| Hypothetical protein CBG13527 [Caenorhabditis briggsae AF16]
gi|39587908, gi|... - gi|39587908|emb|CAE67927.1| Hypothetical protein CBG13527 [Caenorhabditis briggsae], gi|187028555|em...
189.0 [0..1] [212..1]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLQWTIVAG VLYAEIAITF TLLLPWIRPT LWSKLFKSRL FTALAKHAHI YSITFGFVLF  60
   61 ILFADGVRET MKY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.387216
Match: PF05529.3
Description: No description for PF05529.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGLEGQMGRT AESDATHHMR LFRAQRNLYI SGFALLLWLV IQRIMTLLGR AAQLEAASEA  60
   61 AMRQAESATK TARTLMNSAD TNEEAAGLAK QIEKLKGELK SANTDRDTLK KQSEGLQREF 120
  121 DRVSDLLRDS AESKGDKKKD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.221849
Match: 2i1jA
Description: No description for 2i1jA was found.

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