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View Structure Prediction Details

Protein: CE25368
Organism: Caenorhabditis elegans
Length: 513 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25368.

Description E-value Query
Range
Subject
Range
CE20119 - status:Partially_confirmed UniProt:Q9XTM4 protein_id:CAB05303.1
534.0 [0..1] [513..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRMKHFHEP FDEKEALIDE NCNDVEIVPT FKYPKRKRTF PTVTKLPKYL LLFFGSTVIC  60
   61 LCIFYISRPQ LNDNFDPNIS DKRKIRIYED IIDAMRNRKK SGNFYIKRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETQHVDCGRI LNGDKEYLQT FSNNNRIPLI KNSYLNMSCS SLQSRIQPEQ FNFKTFKSGS  60
   61 VAFARIVFED YEFIEKQVQM SWHPDNVFCF VIDTKSSKEF KTNMKKLADC FENIIVLPSK 120
  121 HSFDSSGHNQ NLGHTECMQS LLQFENWTYL LLLQNHDVIS KSVYELARIF EILGGANDVN 180
  181 IGKEIDQRRV PGLKWDPKNL KLFRNESGLD DELLKKPMKI ASGYVQASLS RAAVEWLINT 240
  241 VDLTLFINQF DRTKYGGDEQ LISSFQVNSQ FEMPGHFTDE CSKYRYGHDQ ISRMTQWAGG 300
  301 DVKRCASKTI RHGICLIGIE DFRAVSEMPV IMFNKMLPSF DYSIIDCTAE LLFNRTFLNQ 360
  361 TNIKLNEKYY EEMVTVIYHK DHKNPGYHLN CTPSHQYWKY ENYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle