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View Structure Prediction Details

Protein: CE25310
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25310.

Description E-value Query
Range
Subject
Range
CE25311 - status:Partially_confirmed UniProt:Q9TW59 protein_id:CAB61043.1
582.0 [0..28] [434..343]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDPVEGKGG PQPRGGKKKD ADDEKNAWEE GDFIDEKELK GALQLGVLKT ADSVALRAGE  60
   61 RNGLDMVVEE DVVSQVGALV WDTVAQDWAD DLARFVAHAG RQRVNMDDIS LLTRRNPDLL 120
  121 RAACELAGVD CPQETSGG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKGKPRKRKK DDVTVAPMLR AAPSAPNSQN APLLAPIQEE DDENDDDDEI TILDDQILHT  60
   61 PQQKSYSKKA KFSEEEAPSS RKRISTSTPK TTAERTLKFP DEITPIRQPN DLQEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [254-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVFNRANLSA IEEEEQQDSF DAFGTTGGND SSSKTITNTS SLLRQAEEHR SSIVEPTKDR  60
   61 IEKERLDRLV PDDEEFENAS VDSFDNFNAE PDPAPAPALA PVPEKRTSVF SKKICSFDFD 120
  121 DDDGDDSFDE PVVVVAEVPK LPVQQQKTPK ASGSESKKKP EKRPESSTPS VFSKKNKTIQ 180
  181 LDDHDSFDDF DFGI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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